Genotype Articles
2001 & 2002
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2004 Articles;
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| Hepatitis C Genotype Not Responsible for Serious Liver Disease | |
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Increased intrahepatic hepatitis C virus (HCV) load may not be
associated with more severe liver injury, according to a report from
Australia. The pathogenesis of HCV induced hepatic injury remains unidentified and could be attributable to either direct cytopathic damage by HCV or immune-mediated hepatic injury induced by HCV. It is also possible that both could act simultaneously. "One way to identify whether liver damage is attributable to direct cytopathic damage is to examine whether the degree of viral load correlates with the degree of liver injury," researcher Peter H. McGuinness and colleagues wrote ("Intrahepatic HCV RNA Levels Do Not Correlate with Degree of Liver Injury in Patients with Chronic Hepatitis C," Hepatology, April 1996;23(4):676-687). "Most studies addressing this question have measured the amount of HCV in serum. Ideally, HCV RNA viral load should be estimated directly from liver tissue itself, because serum levels of virus may be contributed to and influenced by extrahepatic sources. Also, the presence of serum immune complexes may introduce further variables. Doubt has also been raised as to the validity of HCV RNA quantitation in serum compared with plasma." HCV has been shown to consist of many distinct genotypes, and while some investigations have found a link between genotype and the severity of liver disease, others have not. "This may be because of the geographical difference in genotype populations, " McGuinness and colleagues wrote. "Most studies may be biased toward a subset of genotypes. This may obscure relationships between genotypes and pathogenicity. "Many researchers have compared HCV load with genotype in blood. Most have demonstrated that genotype 1b tends to be associated with the highest HCV RNA levels. In contrast, there has been no analysis of the effect of different genotypes on intrahepatic HCV RNA levels. Therefore, an analysis of intrahepatic HCV RNA levels must take into account the effect of these genotypes." In this study McGuinness et al. attempted to determine whether there was a correlation between liver HCV RNA load and the degree of liver injury and to examine the effect of interferon alpha (INF-(alpha)) treatment on hepatic HCV RNA load. Liver tissues (n = 56) were obtained from 47 patients with chronic HCV (nine before and after IFN-(alpha) therapy). Total RNA was isolated and quantitated for specific HCV RNA by dot-blot polymerase chain reaction (DB-PCR) using a standard curve created from synthetic HCV RNA of known titer to calculate actual RNA levels. A multivariate analysis was undertaken to determine the relationship of intrahepatic HCV RNA levels with risk factors, length of HCV exposure, and histological injury scores. The confounding effect of HCV genotype was examined by direct sequencing of the NS5b region. Liver HCV RNA ranged from 10(2) to 3.1x10(7) molecules per microgram total liver RNA. "The multiple regression analysis showed no effect of length of HCV exposure, risk factors, degree of bile duct damage, steatosis, or total Scheuer or Knodell score on RNA levels," McGuinness et al. wrote. "No significant confounding effect of HCV genotype on the degree of liver injury was observed. However, genotype 1b had a significantly higher mean intrahepatic HCV RNA load compared with the other genotypes detected." In the nine patients who received IFN-(alpha) treatment, seven had no detectable HCV after treatment. This was associated with a significant decrease in intrahepatic HCV RNA levels (7.57 +/- 2.53x10(5) to 1. 82 +/-1.80x10(3) molecules per microgram total liver RNA +/- SEM, n = 9m P = ..0005). The authors conclude that intrahepatic viral load appears to be significantly increased in patients with genotype 1b, but their results do not support the hypothesis that increased intrahepatic HCV load is associated with more severe liver injury. "These data suggest that the HCV virus does not cause liver injury by simply expanding the viral load and thus resulting in a cytopathic process," McGuinness et al. wrote. "The role of intrahepatic anti- HCV-specific and nonspecific immune responses therefore needs to be examined. It is clear that anti-HCV-specific and nonspecific immune responses are detected in this disease. Their role and the role of intrahepatic cytokine responses in the induction of chronic HCV liver injury clearly require further investigation. Careful sequential studies that simultaneously examine both the virus and the immune response in liver tissue and serum are also clearly needed." The corresponding author for this study is Geoffrey W. McCaughan, The A.W. Morrow Gastroenterology and Liver Center, Royal Prince Alfred Hospital, Missenden Road, Camperdown NSW 2050, Australia. |
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| Pegylated
Interferon and Genotypes
Hepatitis C
Sustained Response by Genotype & HCV Viral Load (See Table 16)
Overall, 49% and 23% at the
end of treatment and the end of follow-up, respectively, in the Peg IFN 1.5
ug/kg dose arm had HCV RNA undetectable (<100 copies/ml). In the IFN alfa-2b
MIU 3x/wk arm, 24% and 12% had undetectable HCV RNA at the end of treatment
and after follow-up. In the Peg IFN 1.0 dose arm 41% and 25% had
undetectable, respectively, at the end of treatment and after follow-up. And
in the Peg 0.5 dose arm, 33% and 18% had undetectable.
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Schering-Plough Reports Phase III PEG-INTRON(TM) Plus
REBETOL(R)Results at American Association For The Study of Liver Diseases
Meeting
54% Sustained Response Overall Achieved in Patients
With Chronic Hepatitis C;
"These results are especially encouraging given the increasing interest
among physicians in tailoring treatment doses to an individual patient's
needs," said Michael P. Manns, M.D., professor and chairman, department of
gastroenterology and hepatology, Hannover Medical School, Hannover, Germany.
"We have learned from this study and previous studies with alpha interferon
that, in addition to genotype, body weight is an important factor in
determining optimal clinical outcome. These results demonstrate that the
dosing flexibility provided by PEG-INTRON plus REBETOL has the potential to
take combination therapy to the next level of hepatitis C treatment," Manns
said.
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| Subject: INFO:HCV GENOTYPES AND CRYOGLOBULINAEMIA | |
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HCV GENOTYPES AND CRYOGLOBULINAEMIA. HCV
Genotypes in Patients with Essential Mixed Cryoglobulinaemia. QJM 88:
805-810 (1995)[96142769]Hepatitis C virus genotype in patients with
essential mixed cryoglobulinaemia. R. A. Sinico, M. L. Ribero, A. Fornasieri,
P. Renoldi, J. Zhou, M.Fasola, G. Portera, G. Arrigo, A. Gibelli, G. D'Amico
& ...Department of Nephrology, Ospedale San Carlo Borromeo, Milan, Italy. We
studied 54 patients with essential mixed cryoglobul- inaemia (EMC),(23
males, 31 females) mean age 61 years (range 28-77). Forty-one(76%) had type
II cryoglobulinaemia and 13 (24%) type III. Antibodies to HCV were
detectable by second-generation ELISA in 49 patients (91%) with confirmed or
indeterminate RIBA results. HCV RNA was detected by RT PCR using 5' UTR
nested primers; HCV genotypes 1a, 1b, 2 and 3a were identified by
genotype-specific core-region nested primers. All patients (49) with
antibodies to HCV in their serum were HCV-RNA positive; 27 (55.1%) had HCV
subtype 1b and 21(42.8%) type 2. In one patient the HCV genotype could not
be determined. The genotype distribution was not different from that found
in patients with chronic hepatitis C without cryoglobulinaemia. However, the
presence of HCV subtype 1b correlated significantly with signs of chronic
hepatitis and presence of peripheral neuropathy. Severity of disease tended
to be worse in patients infected with HCV subtype 1b, but this was mainly
due to liver disease. HCV genotypes may influence the clinical expression
and, in particular, the severity of liver involvement in patients with EMC.
Extent and severity of EMC disease in general may also be affected by the
different HCV genotypes. These findings may have therapeutical implications,
since the different HCV genotypes respond differently to interferon
treatment. |
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Hepatitis C Virus Genotype Linked To Cirrhosis
Hepatitis C Virus Genotype Linked To
Cirrhosis
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What
the genotypes are, and factors which may influence outcome In addition, within a single individual, HCV can change into slightly different forms, called "quasispecies," This may be what makes it difficult for the body to detect and eliminate HCV and why people with HCV report such a variety of symptoms or no symptoms at all. All these various forms of HCV also pose problems for scientists trying to develop treatments and vaccines that can be effective against all mutations of HCV." ~ Bethann Roybal, "HCV - A Personal Guide to Good Health" We now know that the genotype one may have an influence on response to treatment with interferon. The problem remains, however, that due to the mutations of one genotype into another, or the development of 'quasispecies', it can be debated that genotypes may not be as dependable as once thought. Having said that, the following is a chart showing which types are more likely than others to influence response to interferon treatment: |
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| Genotype-related Response Rate to Interferon Treatment: | |
| Type 1 (particularly 1b), prevalent in the US & Canada, is considered to be quite resistant to treatment using Interferon based formulas. | |
| Type 2 (or 2a and 2b), in comparison to type 1 appears to have a much higher rate of response to treatment using Interferon-based formulas. | |
| Type 3 also appears to have a higher response rate than type 1. | |
| Type 4 appears to be less responsive to treatment using Interferon than type 2 & 3. | |
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Clinicians are experimenting with new dosage regimes and combination therapy (using Interferon with Ribavirin) to try to address this problem. ~ From "The Hepatic C Handbook", by Matthew Dolan However, some doctors believe that the apparent influence of genotype may reflect the following: The duration of the infection. Because type 1b is 'older' in many countries, it may be that patients infected with this strain have had more time to progress. The time the virus has been present is known to influence the degree to which disease has progressed. Viral heterogeneity. The longer HCV has been present, the more likely it is to have mutated into viable quasispecies, makin it a more difficult target for drug therapy. Age of the patient. This is also thought be a factor; the younger, the better. Health of the liver. Good liver function and the absence of cirrhosis and fibrosis are good signs. Fitness of the patient. This is also thought to have a bearing by many doctors. Patients who are significantly overweight have been observed to have lower response rates. Iron levels in the liver cells. Also have a bearing; the lower, the better. Patients with a history of heavy drinking tend to have higher levels of iron deposition in their liver cells. ~ From "The Hepatitis C Handbook", Matthew Dolan Genotypes of HCV
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| Types 1, 2, 3: Worldwide, including US | |
| Type 4: Middle East & Africa | |
| Type 5: South Africa | |
| Type 6: Asia | |
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Within each genotype are subgroups, such as genotype 1a and 1b. A quicker, easier way to classify HCV is serotyping, which groups HCV based on antibodies detected. Serotypes correlate with genotypes. This method of classifying HCV is not as accurate, however, as genotyping. ~ from "HCV - A Personal Guide to Good Health", by Roybal
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DOES
GENOTYPE PLAY ROLE IN HCV PROGRESSION?
DOES
GENOTYPE PLAY ROLE IN HCV PROGRESSION? There
appears to be some controversy about this but several studies listed below
suggest disease progression may be worse in genotype 1 than 2. The
Second Department of Internal Medicine, Shinshu University School of
Medicine, Matsumoto, Japan.
This study
was conducted to clarify if the long-term histological outcome among
patients with chronic hepatitis C differs according to whether they are
infected with genotype 1 or 2 hepatitis C virus (HCV). We examined 140
patients with chronic hepatitis C. The HCV genotype was determined by the
enzyme-linked immunosorbent assay (ELISA) based on genotypes 1 and 2
specific recombinant proteins; genotype 1 was found in 100 patients (96
were 1b and 4 were indeterminate) and genotype 2 in 36. The two groups
showed no significant difference for any clinical background features.
Deterioration of the grade of liver histology during the follow-up period
was seen in 68.0 percent of the patients with genotype 1 as compared with
41.7 percent of those with genotype 2 (P < .01). Similarly, the
deterioration of the stage of liver histology was more common in the
former group than in the latter (63.0 percent and 38.9 percent
respectively; P < .05). The mean serum HCV-RNA titer was significantly
higher in the patients with genotype 1 than in those with genotype 2 (P <
.001), and multivariate analysis showed the titer was one of the
independent factors of the deterioration of the stage (P = .0044). This
phenomenon may be related in part to the difference in pathogenicity
between the two HCV genotypes. In conclusion, WHY IS
INTERFERON MORE SUCCESSFUL IN GENOTYPE 2 THAN INDIVIDUALS WITH GENOTYPE
1? Effects
of interferon treatment on the antiviral T-cell response in hepatitis C
virus genotype 1b- and genotype 2c-infected patients G Missale,
E Cariani, V Lamonaca, A Ravaggi, A Rossini, R Bertoni, M Houghton, Y
Matsuura, T Miyamura, F Fiaccadori The
T-cell response to HCV peptides and recombinant core protein
detected throughout the follow-up was significantly more vigorous in
genotype 2c- than in genotype 1b- infected patients. This difference
was the result of a greater enhancement of the T-cell response caused by
IFN treatment in genotype 2c- compared with genotype 1b-infected patients.
The different IFN modulatory effect on T cells from genotype 1b- and
genotype 2c-infected patients illustrates an aspect of the virus-host
interaction, which may contribute toward the explanation of why different
genotypes differ in responsiveness to IFN The T-cell
response to HCV core protein was sequentially analyzed before and during
IFN treatment in two groups of patients chronically infected with HCV
genotype 1b (eight patients) or 2c (eight patients). Overlapping 20 mer
peptides corresponding to the amino acid sequence of the prevalent viral
population identified in the serum of each patient were used for the
analysis of the T-cell proliferative response to avoid possible problems
caused by amino acid differences between infecting virus and HCV proteins
used in vitro. Recombinant HCV core antigen was used in parallel. The
level of viremia was monitored by competitive polymerase chain reaction (PCR). My take:
The following study suggests individuals with cirrhosis don't progress
more quickly whether they have genotype 1 or 2. This does not mean that
genotype 1 or 2 may not affect progression prior to cirrhosis developing. Lack of
correlation between hepatitis C virus genotypes and clinical course of
hepatitis C virus-related cirrhosis L Benvegnu,
P Pontisso, D Cavalletto, F Noventa, L Chemello and A Alberti Clinica
Medica Second, University of Padova, Italy.
The
influence of the hepatitis C virus (HCV)-genotype on liver disease
severity was evaluated in 429 consecutive patients with chronic hepatitis
C, including 109 with cirrhosis who were followed up prospectively,
allowing for the assessment of the role of the HCV- genotype on disease
outcome and on the development of hepatocellular carcinoma (HCC). HCV-1
was detected in 147 (46%) patients without cirrhosis and in 47 (43%) with
cirrhosis (P: not
significant), being mainly HCV-1b. HCV-2 was found in 103 (32%) cases
without cirrhosis and in 30 (27.5) with cirrhosis (P: not significant), Results
from following study correlate genotype 1 with developing liver cancer
Hepatitis C virus genotypes and risk of hepatocellular carcinoma in
cirrhosis: a prospective study
S Bruno, E
Silini, A Crosignani, F Borzio, G Leandro, F Bono, M Asti, S Rossi,
ALarghi, A Cerino, M Podda and MU Mondelli Divisione di Medicina Generale
III, Cattedra di Medicina Interna, Istituto di Scienze Biomediche San
Paolo, Universita di Milano, Italy.
A
prospective study was performed to establish whether infection with
specific hepatitis C virus (HCV) genotypes was associated with an
increased risk of development of hepatocellular carcinoma (HCC) in
cirrhosis. A cohort of 163 consecutive hepatitis C virus antibody (anti-
HCV)-positive cirrhotic patients was prospectively evaluated for the
development of HCC at 6-month intervals by ultrasound (US) scan and
alpha-fetoprotein (AFP) concentration. HCV genotypes were determined
according to Okamoto. Risk factors associated with cancer development were
analyzed by univariate and multivariate statistics. At enrollment, 101
patients (62%) were infected with type 1b, 48 (29.5%) were infected with
type 2a/c, 2 (1.2%) were infected with type 3a, 1 (0.6%) was infected with
type 1a, 3 (1.8%) had a mixed-type infection, and, in 8 patients (4.9%),
genotype could not be assigned. After a 5- to 7-year follow-up (median, 68
months), HCC developed in 22 of the patients, 19 infected with type 1b and
3 with type 2a/c (P < .005). Moreover, HCC developed more frequently in
males (P < .01), patients with excessive alcohol intake (P < .01), those
over 60 years of age (P < .02), and in patients who did not receive
interferon treatment (P < .02). Multivariate analysis showed that type 1b
was the most important risk factor associated with tumor development (odds
ratio 6.14, 1.77-21.37 95% confidence interval). Other independent risk
factors were older age and male sex. Cirrhotic patients infected with HCV
type 1b carry a significantly higher risk of developing HCC than patients
infected by other HCV types. The latter may require a less intensive
clinical surveillance for the early detection of neoplasia. This
study also suggests genotype 1 is more associated with disease severity
than genotype 2. Influence
of different hepatitis C virus genotypes on the course of asymptomatic
hepatitis C virus infection D Prati, C
Capelli, A Zanella, F Mozzi, P Bosoni, M Pappalettera, F Zanuso, L
Vianello, E Locatelli, C de Fazio, G Ronchi, E del Ninno, M Colombo and G
Sirchia Centro Trasfusionale e di Immunologia dei Trapianti, Ospedale
Maggiore, Milano, Italy.
BACKGROUND & AIMS: The association of liver disease with hepatitis C
virus (HCV) genotypes mainly refers to patients with serious liver damage;
little information is available on symptomless carriers. The aim of this
study was to investigate the correlation of genotypes with clinical
course, risk factors for infection, and antibody to HCV reactivity in
asymptomatic subjects. METHODS: One hundred nine viremic blood donors with
at least 1 year of follow-up were studied; 41 underwent liver biopsy.
Genotypes were determined by line-probe assay. RESULTS: Genotype 1 was
found in 47 (43.1%), genotype 2 in 48 (44%), genotype 3 in 8 (7.3%),
genotype 4 in 2 (1.8%), and coinfections in 4 (3.7%). The relative risk
(RR) for a raised pattern of alanine amino-transferase, aspartate
aminotransferase, and gamma- glutamyl-transpeptidase was 2.1
(confidence interval [CI], 1.4-3.2), 1.7 (CI, 1.2-2.4), and 2.8 (CI,
1.6-4.9) in subjects with genotype 1 vs. 0.4 (CI, 0.2-0.7), 0.4 (CI,
0.3-0.7), and 0.4 (CI, 0.2-0.8) in subjects with genotype 2.
Chronic hepatitis was found in 68%; the RR of chronic hepatitis was
similar for genotypes 1 and 2 (RR, 1.1 [CI, 0.8-1.7] vs. RR, 1.0 [CI,
0.7-1.6]). Reactivity to NS4-derived antigens was infrequent in type
2-infected subjects. CONCLUSIONS: Genotype 2 was as frequent as
genotype 1 but associated with less liver function impairment. The
high prevalence of chronic hepatitis should be considered in counseling
viremic asymptomatic donors.
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| Hepatitis Therapy should be individually Tailored | |
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Hepatitis C Therapy Should Be
Individually Tailored
Starting Virus Levels, Genotype Predict Response to Interferon Treatment Viral genotype and baseline virus levels predict response to interferon (IFN) treatment for patients with chronic hepatitis C virus (HCV) infection. Therapy with interferon alfacon-1 (Infergen, Amgen) should be tailored for each patient's condition. Today's standard treatments do not adjust therapy based on individual patient's requirements. But patients with genotype 2 or 3 virus generally respond better than those with genotype 1. So do patients with lower baseline virus levels. (About 70% of HCV patients in the U.S. have genotype 1 virus.) F. Blaine Hollinger, M.D., Professor of Medicine, Virology, and Epidemiology at Baylor College of Medicine in Houston, says a clinical trial he did shows that many patients will respond if given enough interferon, "and if you give them daily doses, for example, instead of three times a week or every other day." The study he presented at the 1999 meeting of the American Association for the Study of Liver Diseases provides evidence that optimal IFN doses and schedules may differ depending on genotype and baseline virus concentration. The patients were divided into two groups, according to their baseline levels of virus (HCV RNA levels): low, with less than or equal to 106 copies/ml; and high, with greater than 106 copies/ml. Researchers compared the effect of five different induction regimens of IFN alfacon-1 on virus elimination in these patients. They received one of five four-week IFN induction regimens: (1) 7.5 mcg twice a day; (2) 15 mcg once daily; (3) 15 mcg three times a week; (4) 9 mcg daily; or (5) 9 mcg three times a week. After the four-week induction period, all subjects received 9 mcg three times a week for an additional 44 weeks. Patients with low baseline viral concentrations had rapid and consistent decreases in virus levels by week 4 with all induction dosing regimens except 9 mcg three times a week. Within 2 weeks, most patients on the effective regimens had low or undetectable virus levels. Levels continued to decrease or remained low after the 4 week induction period. Patients on the 9 mcg three times a week induction dose required 12 weeks of treatment before their virus levels became undetectable. Patients with high baseline virus levels did not experience as rapid a decrease as did those with low baseline levels. And for some, levels rebounded after switching to 9 mcg three times a week. The researchers speculate that longer induction periods may be necessary for patients with higher baseline viral loads. Besides the faster rate of viral decrease in patients with low baseline levels, more of them responded to every induction dosing regimen when measured at 4 and 12 weeks, compared to patients with high levels. For patients with genotype 1 virus and low baseline virus levels, induction dosing with 15 mcg of IFN daily or 7.5 mcg twice daily produced a more rapid decrease in viral levels than the other induction doses. But genotype 1 patients had rebounds in their virus levels after switching to 9 mcg three times a week. Again, the researchers suggested that longer induction periods may be necessary for these patients. Based on the rate of viral decrease, the researchers calculated the optimal induction period for genotype 1 patients. A dose of 15 mcg once daily required the shortest induction period, 10.4 weeks, to bring virus down to undetectable levels. The standard dose of 9 mcg three times a week required 13.7 weeks. The researchers concluded that treatment of chronic HCV patients should be tailored based on their genotype and viral loads. Patients with low baseline viral concentrations or who are not genotype 1 can achieve maximum benefit when treated with 9 mcg of IFN alfacon-1 daily for 4 weeks and then switched to 9 mcg three times a week for 44 weeks. However, patients with high baseline viral levels or who are genotype 1 may do better if treated with 15 mcg of IFN alfacon-1 daily for 10 weeks, followed by 9 mcg three times a week for the duration. Dr. Hollinger already individualizes therapy based on viral load and genotype, and he goes further by monitoring treatment efficacy along the way. "We often will. treat a patient for four weeks with high dose induction therapy, and then look and find out whether they have undetectable virus at that time," he says. "If they do, then I will switch them to every other day therapy. If they don't, I'll continue on for at least 10 weeks of daily therapy and then switch them to every other day after that and continue the therapy for perhaps in that case up to a year instead of six months." Besides genotype and viral load, Dr. Hollinger thinks race may be another important parameter to consider. "We haven't looked yet at the response rates of African Americans versus Caucasians in this study, but I think that's probably a very important issue as well," he says. African Americans often have more resistant disease than Caucasians. A report of Dr. Hollinger's study and several other highlights from the AASLD meeting are available at the Med On Scene site at www.medonscene.com. The site offers health professionals the opportunity to earn continuing medical, nursing, or pharmacy education credits by completing the educational activity based on AASLD meeting reports. A service of Patients Network, Inc. |
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| Amount of Hepatic Hepatitis C Virus-RNA Not Correlated With Disease Severity | |
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10/10/2001 By Anne MacLennan Amount of hepatic hepatitis C virus-RNA has been
found to be correlated to genotype and response to interferon therapy
but not to histologic lesions. |
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Genotype An Actor In
Acute Hepatitis C Outcome A DGReview of :"Hepatitis C viral genotype influences the clinical outcome of patients with acute posttransfusion hepatitis C" Journal of Medical Virology 11/08/2001 Hepatitis C viral genotype influences the clinical outcome of patients with acute hepatitis C infection. Most patients with acute hepatitis C virus (HCV) infection develop chronic hepatitis, and only about 15 to 20 percent of cases resolve spontaneously. The HCV genotype has been recognized as a key factor affecting clinical course and outcome of chronic hepatitis C patients. However, the mechanism for the different outcomes in patients with acute HCV infection remains unclear. This study by Shinn-Jang Hwang and colleagues from the Veterans General Hospital-Taipei, National Yang-Ming University School of Medicine, Taipei, Taiwan, China, sought to evaluate the role of HCV genotype in the clinical course and outcome of acute post-transfusion hepatitis C. Participants were 67 patients with acute post-transfusion hepatitis C from a prospective study of post-transfusion non-A, non-B hepatitis. Thirty-nine of these patients (58.2 percent) were HCV genotype 1b. Of all the patients, 53 (79.1 percent) progressed to chronic hepatitis. Significantly more patients with genotype 1b (89.7 percent) than non-1b genotypes (64.3 percent) developed chronic hepatitis. Researchers found no significant difference in gender, mean age, amount of transfused blood, hepatitis symptoms, jaundice, incubation period, peak serum alanine transaminase, or serum HCV RNA titer between patients with HCV genotype 1b and non-1b infections. People who developed chronic hepatitis had a significantly greater incidence of genotype 1b infection (66.0 percent versus 28.6 percent) and a longer incubation period (7.3 weeks) than patients whose infection was resolved (5.4 weeks). Those patients with a genotype 1b infection that resolved spontaneously all had an incubation period of less than six weeks. Further analysis revealed genotype 1b and an incubation period of six weeks were significant predictors for development of chronic hepatitis. Thus, the HCV genotype can influence the outcome of patients with acute HCV infection, these authors conclude. J. Med. Virol. 65:505-509, 2001. "Hepatitis C viral genotype influences the clinical outcome of patients with acute posttransfusion hepatitis C"
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SLOW VIRAL DYNAMICS OF HEPATITIS C GENOTYPE 4
– ABSTRACT 969 Hepatitis C Virus of genotype 4 (HCV-4) is the major HCV subtype in Middle Orient (e.g., up to 80% in Egypt) where a large number of patients are chronically infected. Some evidence exists that patients infected with HCV-4 respond to IFN as poorly as those infected with genotype 1 and contrary to the good response in genotype 2-3 infected patients. Indeed, it was previously shown (Neumann et al, JID, 2000) that the viral dynamics of genotype 1 are slower and the effectiveness of IFN to block its production is lower as compared to genotypes 2-3. However, there is no information on the viral dynamics of HCV-4. Interferon-Ribavirin combination treatment (3-6 MU of IFN-a-2a QD and Ribavirin 1200 mg/day) was administered to 5 naïve patients chronically infected with HCV genotype 4 in 2 centers in France. Viral load was frequently assessed during the first month of treatment (daily during the first week, and weekly thereafter) using the bDNA 3.0 (VERSANT HCV 3.0, Bayer) assay (limit of detection 3200 Eq/ml). Viral dynamics parameters were estimated based on the bi-phasic model for HCV dynamics during IFN treatment (Neumann et al, Science, 1998). It was found that viral kinetics of HCV-4 follow the same bi-phasic decline pattern as HCV of genotypes 1, 2 and 3. The mean effectiveness of IFN in blocking production of HCV-4 was 71.9% (with standard deviation of 12.6%) or 0.55 log eq/ml decline during 1st day of treatment, which is highly comparable to that of previous studies with genotype 1 using same treatment regimen (68-74%). In 2 patients with frequent samples during the first day it was possible to estimate the half-life of free virions as 3.5 and 3.7 hours, again comparable to the 3-4 hours half-life measured for genotype 1 and slower than 2 hours for genotype 2. The half-life of the 2nd phase viral decline slope ranged from 2.6 days to larger than 70 days similar to the large variation in 2nd slope observed in genotype 1 infected patients. In summary, the poor response to treatment in patients infected with HCV of genotype 4 can be attributed to the low effectiveness of IFN in blocking its virion production as compared to genotypes 2-3. HCV genotype 4 infected patients should be grouped with genotype 1 when therapy schemes are considered as function of genotype. HCV resistance to IFN treatment can be better understood by looking for the common viral properties of genotypes 1 and 4 as compared to those of genotypes 2 and 3.
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http://www.va.gov/hepatitisC/pved/genotypes_quasispecies.htm The term "genotype" refers to HCV isolates from genetically distinct groups, which have arisen during the evolution of this virus. Hepatitis C virus demonstrates tremendous genetic diversity which has wide-ranging implications for diagnosis and treatment of HCV infection. Currently, there are six known hepatitis C genotypes, each with numerous subtypes. Genotype variation can be found worldwide. However, the relative prevalence of different genotypes differs by geographic region. In the United States, for example, genotype 1 is the most prevalent whereas in Egypt genotype 4 accounts for the majority of infections. Clinical Significance of HCV Genotypes Determining the genotype of an individual patient's HCV isolate may have important treatment implications. Of utmost clinical significance is the role that genotypes play in response to treatment and in determining the optimum duration of treatment. For example, with all treatments tested to date, patients with genotypes 2 and 3 are more than twice as likely as patients with genotype 1 to achieve a sustained virologic response. In addition, when using combination therapy consisting of interferon and ribavirin, a 24-week course is recommended for genotypes 2 or 3 compared to 48 weeks for patients with genotype 1. Although the significance of genotype in treatment response is clear, the influence of genotype on the severity of liver damage and the rate of disease progression has not been well defined. Most investigations suggest one viral genotype is no more virulent than any other, and that other factors are responsible for the variation seen in medical outcomes of chronic hepatitis C infection. Quasispecies and Viral Mutation Within an individual viral isolate identified as a particular genotype, further genetic heterogeneity exists. Through spontaneous mutations, closely related yet significantly different viral genomes evolve over time. These are known as quasispecies. Production of quasispecies is likely to be important in the natural history of hepatitis C infection, since diversification is believed to be one mechanism by which the virus escapes the immune response of the host. Quasispecies differ from genotypes in that genotypes represent major genetic differences that vary in geographic distribution and epidemiologic associations, whereas quasispecies represent minor genetic differences in an individual infected with a single genotype. Quasispecies change in an individual over time, whereas genotypes do not. Quasispecies can be measured quantitatively (viral complexity) and qualitatively (viral divergence over time) although such tests are not currently available as clinical tools. Clinical Significance of Quasispecies HCV quasispecies have a number of important implications for pract |